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Table 2 Summary of methods, research questions best answered, and findings

From: An overview of methods to address distinct research questions on environmental mixtures: an application to persistent organic pollutants and leukocyte telomere length

Method

Research Question

Results

Unsupervised Methods

K-means Clustering Hierarchical Clustering

Are there population subgroups that share similar exposure profiles?

The study population is clustered by level of exposure: high, average, and low. High exposure is associated with longer log-LTL.

PCA

Are there specific patterns in POP exposure?

Three patterns of exposure were identified. Exposure to all POPs (PC1) is associated with longer log-LTL.

EFA

 

Four patterns of exposure were identified. Exposure to all four furans (FA2) and to PCBs 118 and 126 (FA3) is associated with longer log-LTL.

Supervised Methods

Lasso

Which congeners are associated with changes in log-LTL?

PCB 99, PCB 118, PCB 126, and furan 2,3,4,7,8-pncdf are associated with longer log-LTL.

Elastic Net

 

PCB 99, PCB 118, PCB 126, furan 2,3,4,7,8-pncdf, and furan 1,2,3,4,6,7,8 hxcdf are associated with longer log-LTL.

Group Lasso

Which a priori defined congener groups are associated with changes in log-LTL and what is the magnitude of the association with congeners within those groups?

All mPFD congeners are associated with log-LTL, with variability in direction—five mPFDs with longer log-LTL, and three mPFDs with shorter log-LTL. Non-ortho PCBs (PCBs 126 and 169) are associated with longer log-LTL.

WQS

What is the overall effect of the mixture on log-LTL? What congeners are most important?

The mixture index is associated with longer log-LTL. Three furans and both non-ortho PCBs are important mixture members. Furans 1,2,3,4,6,7,8-hxcdf and 2,3,4, 7,8-pncdf has the largest weights.

BKMR

Is there an association between the mixture and log-LTL? What is the exposure-response relationship between each congener and log-LTL? Are there interactions between congeners?

The overall mixture is associated with longer log-LTL. Furan 2,3,4,7,8-pncdf, PCB 126, and PCB 169 are independently associated with longer log-LTL. No interactions or nonlinearities were found.

  1. All 18 congeners were included in all unsupervised and supervised models