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Table 1 Number of transcript clusters whose expression is disturbed at different cut-off threshold p-values

From: Transcriptome profile analysis reflects rat liver and kidney damage following chronic ultra-low dose Roundup exposure

p-value

Liver

Kidney

Random

0.05

8606(0.21)

8656(0.21)

1835(0.98)

0.01

4224(0.08)

4447(0.08)

380(0.96)

0.001

1593(0.02)

1894(0.02)

31(0.95)

0.0001

630(0.006)

764(0.005)

1(0.95)

0.00001

230(0.002)

219(0.002)

0

  1. The number in superscript parenthesis is the maximal q-value (calculated using Benjamini-Hochberg method according to corresponding to the number of genes found disturbed at increasing (0.05 to 0.00001) p-value stringency. A statistical analysis of simulated random samples was also performed to estimate effects that would be expected to arise by chance